This episode of the Planters Punch is a small, imaginary journey inside of a plant, showing you what models are, and how to use computational biology to explore photosynthetic life.
Enjoy the video!
German and English subtitles can be selected on our YouTube channel!
Under the heading Planter’s Punch we present each month one special aspect of the CEPLAS research programme. All contributions are prepared by our early career researchers.
Tobias Pfennig is a doctoral researcher of Anna Matuszyńska at the RWTH Aachen. He began studying general biology and got interested early in data analysis and modelling. Since joining the CEPLAS Grad School in 2020, he is focuses on plants and their ancestors, the cyanobacteria. Using experiments, mathematics, and computers he tries to get behind the governing principles of photosynthetic life.
Stirbet, A., Lazár, D., Guo, Y., & Govindjee, G. (2020). Photosynthesis: Basics, history and modelling. Annals of Botany, 126(4), 511–537.
Old and new models
Pettersson, G., & Ryde-Pettersson, U. (1988). A mathematical model of the Calvin photosynthesis cycle. In Eur. J. Biochem (Vol. 175).
Saadat, N. P., Nies, T., van Aalst, M., Hank, B., Demirtas, B., Ebenhöh, O., & Matuszyńska, A. (2021). Computational Analysis of Alternative Photosynthetic Electron Flows Linked With Oxidative Stress. Frontiers in Plant Science, 12(October), 1–11.